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C-DEBI Newsletter – January 18, 2022
A biweekly digest of deep biosphere news and opportunities
from the Center for Dark Energy Biosphere Investigations

 

Publications


Journal of Geophysical Research: Solid Earth
Numerical simulation of cool hydrothermal processes in the upper volcanic crust beneath a marine sediment pond: North Pond, North Atlantic Ocean - NEW!

Price, A. N.*, Fisher, A. T.*, Stauffer, P. H., & Gable, C. W.
*C-DEBI Contribution 580

Low temperature hydrothermal systems hosted in the volcanic oceanic crust are responsible for ∼20% of Earth's global heat loss. Marine sediment ponds comprise an important type setting on young ridge flanks where hydrothermal circulation advectively extracts lithospheric heat, but the nature of coupled fluid-heat transport in these settings remains poorly understood. Here we present coupled (fluid-heat) numerical simulations of ocean crustal hydrogeology in and below North Pond, a sediment pond on ∼8 Ma seafloor of the North Atlantic Ocean. Two- and three-dimensional simulations show that advective transport beneath North Pond is complex and time varying, with multiple spatial and temporal scales, consistent with seafloor and borehole observations. A unidirectional, single-pass flow system is neither favored nor needed to match the spatial distribution of seafloor heat flux through North Pond sediments. When the permeability of the crustal aquifer is relatively high (10−10–10−9 m2), simulations can replicate much of the observed variability and suppression of seafloor heat flux and can explain basement overpressures and transient perturbations in pressure and temperature in the upper volcanic crust. Simulation results can also help explain heterogeneity in pore fluid chemistry and microbiology in the crust. Although driven by the same physical processes, the dynamics of hydrothermal circulation below North Pond are different from those seen on "discharge-dominated" ridge flanks, where the permeability and exposed area of isolated basement outcrops control the extent of regional heat extraction.
 

Nature Microbiology
Unique mobile elements and scalable gene flow at the prokaryote–eukaryote boundary revealed by circularized Asgard archaea genomes - NEW!

Fabai Wu*, Daan R. Speth*, Alon Philosof, Antoine Crémière, Aditi Narayanan*, Roman A. Barco*, Stephanie A. Connon, Jan P. Amend*, Igor A. Antoshechkin & Victoria J. Orphan*
*C-DEBI Contribution 590

Eukaryotic genomes are known to have garnered innovations from both archaeal and bacterial domains but the sequence of events that led to the complex gene repertoire of eukaryotes is largely unresolved. Here, through the enrichment of hydrothermal vent microorganisms, we recovered two circularized genomes of Heimdallarchaeum species that belong to an Asgard archaea clade phylogenetically closest to eukaryotes. These genomes reveal diverse mobile elements, including an integrative viral genome that bidirectionally replicates in a circular form and aloposons, transposons that encode the 5,000 amino acid-sized proteins Otus and Ephialtes. Heimdallaechaeal mobile elements have garnered various genes from bacteria and bacteriophages, likely playing a role in shuffling functions across domains. The number of archaea- and bacteria-related genes follow strikingly different scaling laws in Asgard archaea, exhibiting a genome size-dependent ratio and a functional division resembling the bacteria- and archaea-derived gene repertoire across eukaryotes. Bacterial gene import has thus likely been a continuous process unaltered by eukaryogenesis and scaled up through genome expansion. Our data further highlight the importance of viewing eukaryogenesis in a pan-Asgard context, which led to the proposal of a conceptual framework, that is, the Heimdall nucleation–decentralized innovation–hierarchical import model that accounts for the emergence of eukaryotic complexity.

 

Meetings & Activities


iDOOS: DOERs Early Career Professional Development Program
General enrollment for the DOERs program is now closed. However, we are still considering applications from dedicated future deep ocean leaders interested in the DOERs program. To be considered for enrollment, please send us an email (info@deepoceanobserving.org) with your name, job title, affiliation, email address, and a couple of sentences about why you are interested in the program.

C-DEBI Virtual Meeting Series: The Crustal Ocean Biosphere Research Accelerator (COBRA) – New Horizons for Deep-Sea and Subsurface Research Connected to Societal Issues, January 7, 2022 - NEW!
Missed this presentation?  The recording is available now!

AbSciCon22: Submit Abstracts to Origins and Exploration: From Stars to Cells, May 15-20, 2022 - NEW!
Consider submitting an abstract to the session Life Detection in Deep Biosphere Earth Analog Environments convened by Melody Lindsay, Jacqueline Goordial, Julia M. McGonigle, Elizabeth Trembath-Reichert, and Laura M. Barge. Or session Chemometric, Chemoinformatic, and Machine Learning Strategies to Characterize Complex Organic and Inorganic Mixtures convened by Laura Rodriguez, Bethany Theiling, Jim Cleaves, and Lu Chou. Abstract submission deadline: January 19, 2022.

IODP-USSSP: Apply to Sail as Onboard Outreach Officer for IODP Expedition 397, 398 or 399
Applications due January 21, 2022.

NSF: COVID-19 Diversity, Equity, and Inclusion Challenge
Entries will be accepted via Challenge.gov until January 30, 2022.

NSF: Policy Office Webinar Series - Current and Pending Support - NEW!
The National Science Foundation is pleased to announce that it will be launching a 2022 NSF Policy Office Webinar Series, beginning with a webinar covering NSF’s Current and Pending Support policy and frequently asked questions on this topic. Register in advance of the first webinar on January 31, 2022.

IODP-USSSP: Apply to Sail as a Scientist on IODP Expedition 399: Building Blocks of Life, Atlantis Massif, April 7 - June 7, 2023
Application deadline: February 1, 2022.

UNOLS: Early Career Marine Sediment Sampling PI Training Cruise Opportunity
Application review begins on February 1, 2022.

Deep Science Submergence Committee (DeSSC): Virtual Annual Community Meeting, February 25, 2022
Stay tuned for the agenda and register in advance of the virtual meeting February 25, 2022 from 1-5PM Eastern.

Goldschmidt 2022: Call for Abstracts for Hybrid Conference, July 10-15, 2022
The abstract submission deadline is March 1, 2022

Microenergy 2022: International Workshop on Microbial Life under Extreme Energy Limitation, September 5-9, 2022 - NEW!
The limits of microbial life and the exploration of the biological demand for energy is the focus of the International Workshop on Microbial Life under Extreme Energy Limitation,  held 5-9 September at Sandbjerg Manor near Sønderborg, Denmark. We invite researchers and students from different relevant disciplines to participate in the workshop in order to discuss microbial energy requirements and stimulate new thinking and new approaches. Deadline for abstract submission and application: April 1, 2022.

Gordon Research Conference/Seminar: Marine Microbes, May 28 - June 3, 2022
The GRS application deadline is February 28, 2022 (for Speaker Abstracts) or April 30, 2022. The GRC application deadline is May 1, 2022.

Ongoing Activities:

 

Education & Outreach


WHOI: 2022 Summer Student Fellowship (REU) in Ocean Sciences and Engineering - NEW!
A research project is at the heart of the Summer Student Fellowship at the Woods Hole Oceanographic Institution (WHOI). Fellows have the opportunity to conduct research with access to more than two hundred practicing scientists and engineers and the facilities of a major oceanographic institution. Fellowship recipients participate in seminars, professional development, social activities, and a hands-on, one-day, ocean sampling cruise on board the R/V Tioga focusing on data collection and sampling methods with advanced oceanographic technology and instruments. The fellowship provides a stipend of $670/week, as well as housing and a travel allowance. Students from groups underrepresented in ocean science and engineering are encouraged to apply. Undergraduate STEM majors who will have completed their junior year are eligible. Application deadline: February 5, 2022

LDEO/UNOLS: 2022 STEMSEAS Student Experiences Aboard Ships
Application deadline: February 6, 2022

2022 Geobiology Summer Course: June 12 - July 19, 2022
Applications are due by February 7, 2022

MATE/UNOLS: 2022 MATE Internship Program
Application deadline for summer and fall program: February 20, 2022



Proposal Calls


NSF HRD: Tribal Colleges and Universities Program (TCUP)
Various deadlines.

NSF BIO: Building Research Capacity of New Faculty in Biology (BRC-BIO)
Submission window date: January 3-31, 2022.

NSF BIO: Integrative Research in Biology (IntBIO)
Full proposal deadline date: January 25, 2022.

NSF OIA: Science and Technology Centers: Integrative Partnerships (STC)
Preliminary Proposal Due Date: February 1, 2022.

NSF GEO: Frontier Research in Earth Sciences (FRES)
Full proposal deadline: February 2, 2022.

NSF: Mid-Career Advancement (MCA)
Full proposal target date: February 7, 2022.

NSF OCE: Chemical Oceanography
Full proposal target dates: February 15, 2022 and August 16, 2022.

NSF OCE: Physical Oceanography
Full proposal target dates: February 15, 2022 and August 16, 2022.

NSF BIO / NIH: Enabling Discovery through GEnomics (EDGE)
Full proposal deadline: February 17, 2022.

NSF EHR: Science, Technology, Engineering and Mathematics (STEM) Education Postdoctoral Research Fellowships (STEM Ed PRF)
Full proposal deadline: March 1, 2022.

NSF: Understanding the Rules of Life: Emergent Networks (URoL:EN)
Predicting Transformation of Living Systems in Evolving Environments

Full proposal deadline: March 1, 2022.

NSF: Research Experiences for Undergraduates (REU)
Full proposal deadline date: August 24, 2022.

NSF: Research Traineeship (NRT) Program
Full proposal deadline date: September 6, 2022.

Rolling Calls:



Employment


WHOI: Tenure Track Scientist
Applications will begin to be reviewed on January 18, 2022.

NOAA Ocean Exploration: Senior Expedition Coordinator - NEW!
Join NOAA Ocean Exploration as a Physical Scientist, ZP-1301-3/4 position located in either Silver Spring, MD or Durham, NH. This position will serve as the Lead/Senior Expedition Coordinator in the Operations team of our Expeditions and Exploration Division. We’re seeking a diverse candidate pool of innovative thinkers who are excited to make tangible contributions to exploring our largely unknown ocean. Application deadline: January 24, 2022.

University of Virginia: Postdoctoral Fellowship in Environmental Sciences
Applications should be submitted by February 1, 2022 for full consideration.

University of Delaware: Department Chair of Earth Sciences
For best consideration, application materials should be received by February 15, 2022.

University of Toronto: Assistant Professor of Mineral Systems
All application materials, including reference letters, must be received by February 15, 2022.

University of New Hampshire: Postdoc in Marine Microbial Biogeochemistry - NEW!
The Ziervogel lab at the University of New Hampshire (UNH) is seeking a highly motivated postdoc to conduct research in the field of marine microbial biogeochemistry related to a multi-institutional project funded by NSF’s Established Program to Stimulate Competitive Research (EPSCoR). This ongoing project aims to further our understanding in microbially-mediated cycling of organic matter in the ocean, combining biogeochemical tools with single cell genomics. This 2-year postdoc fellowship targets recent PhDs or current postdocs from Minority Serving Institutions in the United States or its territories to work at UNH within this highly interdisciplinary team of PIs, postdocs and graduate students from the collaborating institutions. Application deadline: May 31, 2022.

Cabrillo College: Adjunct Instructor of Oceanography
This adjunct position is open for application submission through the deadline December 17, 2022 or until the position has been filled.

Columbia/LDEO: Associate Research Scientist/Research Scientist in Marine Geology and Geophysics

University of Miami: Open Rank Faculty Search Rosenstiel School of Marine and Atmospheric Sciences

Swiss Federal Institute of Technology Lausanne (EPFL): Postdoctoral Researcher in Microbial Processes in Bentonite

University of Toronto: Postdoctoral Position(s) in Fluid-Rock Interactions & Investigation of Deep Subsurface Life

Carnegie Institution (Stanford): Postdoctoral in Microbial Ecological Modeling of the Marine Nitrogen Cycle

Carnegie Institution (Stanford): Postdoctoral in Ecological Modeling of Marine Microheterotrophic Communities

Pennsylvania State University: Postdoctoral Researcher on Microbial Metabolic Networks

2021-2022 Earth and Environmental Science Jobs List


Email me with any items you'd like to share in future newsletters. You are what makes our deep biosphere community!

 
Rosalynn Sylvan
C-DEBI Managing Director
University of Southern California, Los Angeles, CA 90089-0371
rosalyyl@usc.edu

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